Additional File 6:

Table S2. List of the significant markers from GWAS in 2014 and 2015 in the full panel, the indica and the japonica subpanels. The position (POS, in bp) in the chromosome (CHR) of each marker (based on MSU7.0 O. sativa Nipponbare reference genome) is indicated. The p-values associated to the traits are indicated. The values in bold are below 1. 10− 4. Primary branch number (PBN), secondary branch number (SBN), spikelet number (SpN), primary branch length (PBL), primary internode length (PBintL), secondary branch length (SBL), secondary internode length (SBintL), tertiary branch number (TBN) and rachis length (RL). (XLS 151 kb)