Ratio of actual over expected frequencies (based on marginal frequencies) of interactions (mfDCA) between different sequon related positions.
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https://figshare.com/articles/dataset/_Ratio_of_actual_over_expected_frequencies_based_on_marginal_frequencies_of_interactions_mfDCA_between_different_sequon_related_positions_/1464572
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The interactions are distributed unevenly (X2, p<0.001). As expected there is a preference to N-S/T relationship obviating the epistatic link in the individual sequons. Further, variable sequons are related mostly to themselves forming cliques in the variable loops. The preference of frequent for rare N positions indicates that the rare sequons may be often variants of the frequent. At the same time S/T positions of variable sequons are related also to N positions of rare sequons.
相互作用的分布并不均匀(X²检验,p<0.001)。正如预期,样本对天冬酰胺-丝氨酸/苏氨酸(N-S/T)关联存在偏好,这一偏好消除了单个糖基化位点(sequon)内的上位性关联。进一步分析发现,可变糖基化位点大多与其自身形成关联,在可变环中构成完全子图(clique)。高频N位点相较于低频N位点的偏好性表明,低频糖基化位点往往是高频位点的变异体。与此同时,可变糖基化位点的丝氨酸/苏氨酸位点,也与低频糖基化位点的天冬酰胺位点存在关联。
创建时间:
2015-06-25



