PacBio based genome assemblies of Neurospora intermedia spore killer strains
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High-quality genome assemblies of six Neurospora intermedia strains, based on PacBio RSII long-read sequencing data.See Svedberg et al., (2018) "Convergent evolution of complex genomic rearrangements in two fungal meiotic drive elements" for further information: https://www.nature.com/articles/s41467-018-06562-x (DOI:10.1038/s41467-018-06562-x) Table 1 contains statistics for the PacBio sequencing and assemblies.Raw PacBio reads have been deposited in the Sequence Read Archive (SRA) in BioProjects PRJNA486257 (http://www.ncbi.nlm.nih.gov/bioproject/486257).Five of the strains carry Spore Killer meiotic drive elements, and one is sensitive to spore killing.All strains can be ordered from the Fungal Genetics Stock Center at http://www.fgsc.net/ StrainsFGSC number: 8761Phenotype: sensitiveAssembly: Nint.8761pb.corr.order.fasta.gzFGSC number: 7401Phenotype: Sk-2Assembly: Nint.sk2-7401pb.order.fasta.gzFGSC number: 7426Phenotype: Sk-2Assembly: Nint.sk2-7426pb.order.corr.fasta.gzFGSC number: 7427Phenotype: Sk-2Assembly: Nint.sk2-7427pb.order.corr.fasta.gzFGSC number: 7429Phenotype: Sk-2Assembly: Nint.sk2-7429pb.order.corr.fasta.gzFGSC number: 3194Phenotype: Sk-3Assembly: Nint.sk3-3194pb.order.corr.fasta.gz
本数据集包含基于PacBio RSII 长读长测序（PacBio RSII long-read sequencing）数据构建的6株中间脉孢菌（Neurospora intermedia）高质量基因组组装结果。相关详细信息请参阅Svedberg等人2018年发表的论文《两种真菌减数分裂驱动元件（meiotic drive elements）的复杂基因组重排趋同进化》，链接为：https://www.nature.com/articles/s41467-018-06562-x，DOI：10.1038/s41467-018-06562-x。 表1收录了本次PacBio测序及基因组组装的相关统计信息。原始PacBio读段已提交至序列读段档案库（Sequence Read Archive, SRA）下的BioProjects项目PRJNA486257，对应链接为http://www.ncbi.nlm.nih.gov/bioproject/486257。 本次研究涉及的6株菌株中，5株携带孢子杀手（Spore Killer）减数分裂驱动元件，剩余1株对孢子杀伤作用敏感。所有菌株均可从真菌遗传学保藏中心（Fungal Genetics Stock Center, FGSC）获取，其官方网址为http://www.fgsc.net/。各菌株具体信息如下： 1. FGSC编号：8761，表型：敏感，基因组组装文件：Nint.8761pb.corr.order.fasta.gz 2. FGSC编号：7401，表型：Sk-2，基因组组装文件：Nint.sk2-7401pb.order.fasta.gz 3. FGSC编号：7426，表型：Sk-2，基因组组装文件：Nint.sk2-7426pb.corr.fasta.gz 4. FGSC编号：7427，表型：Sk-2，基因组组装文件：Nint.sk2-7427pb.corr.fasta.gz 5. FGSC编号：7429，表型：Sk-2，基因组组装文件：Nint.sk2-7429pb.corr.fasta.gz 6. FGSC编号：3194，表型：Sk-3，基因组组装文件：Nint.sk3-3194pb.corr.fasta.gz
