遇见数据集

Unpartitoned Analysis

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Figshare2016-01-19 更新2026-04-08 收录
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Best tree from unpartitioned RaxML analysis of concatinated alignment of amino acid sequences for 208 single-copy genes from 35 Agaricales taxa plus four outgroups (Newick format) Includes: -Best-scoring ML tree with branch lengths (RAxML_bestTree.AllConcatinatedProt.phy) -Best-scoring ML tree with support values (RAxML_bipartitions.AllConcatinatedProt.phy) -Best-scoring ML tree with branch lengths and support values as branch labels (RAxML_bipartitionsBranchLabels.AllConcatinatedProt.phy) -Best-scoring ML trees from each bootstrap replicate (RAxML_bootstrap.AllConcatinatedProt.phy) -Info about analysis (RAxML_info.AllConcatinatedProt.phy)

本数据集涵盖针对35个伞菌目(Agaricales)类群及4个外类群的208个单拷贝基因氨基酸序列串联比对结果,经非分区RAxML分析得到的最优进化树(格式为Newick),具体包含以下内容: - 带有分支长度的最优最大似然树(RAxML_bestTree.AllConcatinatedProt.phy) - 带有支持值的最优最大似然树(RAxML_bipartitions.AllConcatinatedProt.phy) - 以分支标签形式同时标注分支长度与支持值的最优最大似然树(RAxML_bipartitionsBranchLabels.AllConcatinatedProt.phy) - 各自举(bootstrap)重复样本对应的最优最大似然树(RAxML_bootstrap.AllConcatinatedProt.phy) - 本次分析的相关信息(RAxML_info.AllConcatinatedProt.phy)

创建时间:
2015-06-08
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