Data and Code from: Pollution-Driven Selection in a Non-Biting Midge: Genome-Wide Responses to Bacillus thuringiensis israelensis and Copper

This repository contains the complete code used to analyze data from the Multigeneration Experiment 2 (MGE2) described in Röder et al. (2026). The scripts reproduce all statistical analyses, data processing steps, and figure generation reported in the publication. Additional details and instructions are provided in the included README file. Visualizations and code were based on previous work by Reid Brennan, who generously provided all code for the following publication:R.S. Brennan, J.A. deMayo, H.G. Dam, M. Finiguerra, H. Baumann, V. Buffalo, & M.H. Pespeni (2022). Experimental evolution reveals the synergistic genomic mechanisms of adaptation to ocean warming and acidification in a marine copepod. Proceedings of the National Academy of Sciences, 119(38), e2201521119. https://doi.org/10.1073/pnas.2201521119.本仓库包含用于分析Röder等人（2026）中所述的多代实验2（Multigeneration Experiment 2，MGE2）数据的完整代码。这些脚本可复现该发表论文中报告的所有统计分析、数据处理流程及图表生成工作。附带的README文件提供了更多细节与操作说明。 本次可视化与代码基于Reid Brennan的前期工作，其慷慨提供了下述论文的全部代码：R.S. Brennan、J.A. deMayo、H.G. Dam、M. Finiguerra、H. Baumann、V. Buffalo 与 M.H. Pespeni（2022）。《实验进化揭示海洋桡足类适应海洋变暖和酸化的协同基因组机制》，《美国国家科学院院刊（Proceedings of the National Academy of Sciences）》，119(38)，e2201521119。https://doi.org/10.1073/pnas.2201521119。