Gut bacterial microbiome of Carabus convexus in rural vs. urban habitats

Data, KML file, R codes and analysis pipeline to the manuscript entitled "Urbanization reduces gut bacterial microbiome diversity in a specialist ground beetle, Carabus convexus" submitted to Molecular Ecology. Data is showing the median normalized number of reads of the 3839 different bacterial amplicon sequence variants (ASVs) in gut samples of 15 rural female and 16 rural male, 8 urban female, and 9 urban male Carabus convexus beetles. KML file can add to the Google Earth web application (https://earth.google.com/web/) and is showing the exact location of the sampling sites. R codes and analysis pipeline are showing the scripts used for analyses in the R environment.

本数据集包含提交至《Molecular Ecology（分子生态学）》的学术论文《Urbanization reduces gut bacterial microbiome diversity in a specialist ground beetle, Carabus convexus》（城市化降低专食性步甲Carabus convexus的肠道细菌微生物组多样性）的配套数据、KML文件、R代码及分析流程。其中，数据展示了15只雌性乡村、16只雄性乡村、8只雌性城市以及9只雄性城市的Carabus convexus步甲肠道样本中，3839个细菌扩增子序列变体（Amplicon Sequence Variant, ASV）的标准化序列读长中位数；KML文件可导入谷歌地球（Google Earth）网页版（https://earth.google.com/web/），用于展示采样点的精确地理位置；R代码与分析流程则包含了在R语言环境中开展数据分析所用的全部脚本。