Additional file 4: of In silico analysis of fungal small RNA accumulation reveals putative plant mRNA targets in the symbiosis between an arbuscular mycorrhizal fungus and its host plant

Characterization of sRNA-generating loci. For each of the predicted 2131 sRNA-generating loci we reported: the name, the genome coordinates, the miRNA prediction result, the possible overlap with protein-coding genes (reported with JGI protein ID), the differential expression analysis results of differential expression analysis, the length, the number of mapped sRNA reads, the eventual ID of homologous loci from RepBase (when available), the results of DBSCAN clustering, the proportion of mapped sRNA reads of each length (from 18 nt to 35 nt). (XLSX 442 kb)

小RNA（sRNA）产生位点的特征分析。针对本研究报道的2131个预测得到的小RNA产生位点，本次分析涵盖以下信息：位点名称、基因组坐标、miRNA预测结果、与蛋白质编码基因的潜在重叠区域（以JGI蛋白ID标注）、差异表达分析结果、序列长度、比对上的小RNA读段数量、若可获取则提供来自RepBase的同源位点最终ID、DBSCAN聚类分析结果，以及18 nt至35 nt各长度的比对小RNA读段占比。（文件格式：XLSX，大小：442 KB）