Supplementary Figure S3 - narG
收藏DataCite Commons2024-07-25 更新2024-08-19 收录
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https://figshare.com/articles/dataset/Supplementary_Figure_S3_-_narG/26370715
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资源简介:
Data files for the narG phylogeny in Supplementary Figure S3 of "Genetic potential for aerobic respiration and denitrification in globally distributed respiratory endosymbionts".<br><br>Files for a narG gene phylogeny of sequences closely related to the narG sequence of Azoamicaceae. The genomes/mags included were obtained from the Genome Taxonomy Database (GTDB) and the genomic catalog of earth's microbiomes (GEM).<br><br>references:<br>GTDB:<br>https://academic.oup.com/nar/article/50/D1/D785/6370255 & https://gtdb.ecogenomic.org/<br>GEM:<br>https://www.nature.com/articles/s41587-020-0718-6 & https://genome.jgi.doe.gov/portal/GEMs/GEMs.home.html
本数据集为《全球分布的呼吸内共生体的有氧呼吸与反硝化作用遗传潜力》一文补充图S3所对应的narG系统发育分析数据文件。
本数据集包含与偶氮粘菌科(Azoamicaceae)narG基因序列高度相似的序列所构建的narG基因系统发育分析相关文件。本次分析纳入的基因组/宏基因组组装基因组(Metagenome-Assembled Genome,MAG)均来自基因组分类数据库(Genome Taxonomy Database,GTDB)以及地球微生物组基因组目录(Genomic Catalog of Earth's Microbiomes,GEM)。
参考文献:
基因组分类数据库(GTDB)相关文献:
https://academic.oup.com/nar/article/50/D1/D785/6370255 及 https://gtdb.ecogenomic.org/
地球微生物组基因组目录(GEM)相关文献:
https://www.nature.com/articles/s41587-020-0718-6 及 https://genome.jgi.doe.gov/portal/GEMs/GEMs.home.html
提供机构:
figshare
创建时间:
2024-07-25



