遇见数据集

ENCODE LR-RNA-seq TSS BED files

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Zenodo2023-12-19 更新2026-05-26 收录
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资源简介:

Included are lapa (files just end in .bed) and Cerberus (files end in _cerberus.bed) TSSs for GM12878 and K562 libraries. Also included is a metadata file that goes from experiment ID to dataset name. Lapa TSSs have been filtered for reproducibility between biological replicates Cerberus TSSs are comprised of a subset of Lapa TSSs and have been filtered for expression >= 1 TPM.

本数据集包含用于GM12878与K562细胞文库的LAPA(文件后缀均为.bed)与Cerberus(文件后缀均为_cerberus.bed)转录起始位点(Transcription Start Site, TSS)数据。同时同步提供一份可将实验ID映射至对应数据集名称的元数据文件。 LAPA转录起始位点已通过生物学重复间的可重复性筛选。 Cerberus转录起始位点为LAPA转录起始位点的子集,且已通过表达量≥1转录每百万reads(Transcripts Per Million, TPM)的筛选标准。

提供机构:
Zenodo
创建时间:
2023-12-05
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