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Identifying crossover locations from leaves of Arabidopsis thaliana Col x Ler F1 plants (WT and recq4) using Nanopore-seq and COmapper

ChEBI2024-08-19 更新2026-07-12 收录

植物遗传重组

Nanopore测序

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-MTAB-14381 数据链接链接失效反馈

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资源简介：

Identifying crossover locations from leaves of Arabidopsis thaliana Col x Ler F1 plants (WT and recq4) using Nanopore-seq and COmapper

应用场景：

创建时间：

2024-08-19

植物遗传重组

能源作物基因组

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Identifying crossover locations in an Arabidopsis thaliana Col x Ler F2 population using genotyping by sequencing.

植物遗传重组

基因分型测序

Genomic DNA from 192 Col x Ler F2 individuals was extracted using CTAB and used to generate sequencing libraries as described (Rowan et al; Yelina et al), with the following modifications. DNA was ext

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Sequencing of various bacterial species with Nanopore Sequencing for whole genome analysis of DNA methylation.

细胞DNA甲基化

Nanopore测序

Sequencing of various bacterial species with Nanopore Sequencing for whole genome analysis of DNA methylation. DNA samples were extracted from isolate cultures. This project include nanopore reads fro

NIAID Data Ecosystem10

Identifying crossover locations in Arabidopsis thaliana wild type Col-0 x Ct-1 F2 populations using genotyping-by-sequencing. Identifying crossover locations in Arabidopsis thaliana wild type Col-0 x Ct-1 F2 populations using genotyping-by-sequencing

植物遗传重组

减数分裂分析

Genomic DNA from 305 Col x Ct F2 individuals was extracted by CTAB and used to generate sequencing libraries as previously described (Hennig et al, 2018 G3). Sequencing data was analysed to identify c

NIAID Data Ecosystem20

Detection of SINEUP RNA modification by Oxford Nanopore direct-RNA sequencing

RNA修饰检测

Nanopore测序

To detect the modifed bases in SINEUP RNA, we compared chemically modified in vitro transcribed (IVT) SINEUP-GFP RNA and in-cell transcribed (ICT) SINEUP RNA from SINEUP-GFP and sense EGFP co-transfec

NIAID Data Ecosystem20

Identifying crossover locations from leaves of Arabidopsis thaliana Col x Ler F1 plants (WT and recq4) using Nanopore-seq and COmapper

资源简介：

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