Performance of the clonal and clinical models on different datasets.*

*The performance of the clonal model on the Sander and Dybowski datasets is compared to the performance of the original methods [20], [21] developed on these datasets. The clinical model constructed on the HOMER dataset is compared to the performance of g2p method in a 10×10-fold cross validation. Additionally the clinical model trained on the HOMER dataset coupled with clinical correlates (VL and CD4+ T cell counts) (HOMER-clinical) is compared to the g2p model also coupled with clinical correlates.