Building <i>in vitro</i> tools for livestock genomics: chromosomal variation within the PK15 cell line

Data from "Building <i>in vitro</i> tools for livestock genomics: chromosomal variation within the PK15 cell line"<b>Coverage files from whole-genome sequencing</b>The coverage textfiles are <i>bedtools coverage</i> output from whole-genome sequencing of two PK15 samples (university laboratory and ATCC), and of fibroblasts.<b>Variants called from whole-genome sequencing</b>A vcf file of variants called from whole-genome sequencing of two PK15 samples (university laboratory and ATCC), and of fibroblasts. The "_AD.txt" files contain allelic coverage depth extracted from these variants by means of bcftools query.<b>Variants called from RNA sequencing</b>A vcf file of SNPs called from publicly available PK15 sequencing.Also, allelic coverage depth file extracted from these variants by means of <i>bcftools query</i>.