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Additional file 3: Table S2. of HiC-bench: comprehensive and reproducible Hi-C data analysis designed for parameter exploration and benchmarking
HiC-bench input-output objects. The table summarizes the inputs and outputs of the TAD-calling task using three different methods with parameter values stored in the params files (column 2). The first
DataCite Commons2024-12-17 更新110
Allele-specific control of replication timing and genome organization during development [ATAC-Seq]
DNA replication occurs in a defined temporal order known as the replication-timing (RT) program. RT is regulated during development in discrete chromosomal units, coordinated with transcriptional acti
NIAID Data Ecosystem70
Identification of topologically associated domains (TADs) in peripheral blood CD34+ cells
We performed a Hi-C experiment on CD34+ cells isolated from peripheral blood and identifed topologically associated domains (TADs). Overall design: Two replicates of mobilized peripheral blood CD34+ c
NIAID Data Ecosystem40
