Table S1 from Lupo et al. Contamination in reference sequence databases: time for divide-and-rule tactics.
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This Excel file is Table S1: Contamination levels for 111,088 bacterial genomes of NCBI RefSeq. This table includes all CheckM classic output fields of contamination estimation (option lineage_wf). Estimates from Physeter in k-fold mode are further provided for 12,326 genomes for which CheckM values were not usable. The reasons for the rejection of CheckM estimates in these cases are given.
创建时间：
2020-10-25
