Supplementary Data S7 - pause sites identified using PRO-seq data
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Supplementary Data S8 of the manuscript "<b>Hypoxia leads to reduced mito-nuclear gene expression and to increased mtDNA transcriptional pausing in human cells</b>" by Shtolz et al.Summary of the total number of pause sites identified for each combination of cell line, strand, and treatment condition.<b>Columns:</b><b>cell</b>: Cell line name (e.g., 'hela', 'u87', 'd407')<b>pause_sites</b>: Total count of pause sites identified for this combination<b>Strand</b>: DNA strand ('Positive' for heavy strand or 'Negative' for light strand)<b>Treatment</b>: Experimental condition ('Control' or 'Hypoxia')This dataframe provides a high-level summary for statistical comparisons and visualization of how many pause sites were detected under different experimental conditions, making it useful for comparative analyses between treatments and strands.
