Enrichment of transcription factor binding sites in the significant interactions identified by SIC models on the Rao GM Hi-C library at fragment sizes 10kb.
We engineered a H1 knockout mutant in Arabidopsis thaliana which shows pleiotropic phenotypes. Using High-throughput Chromosome Conformation Capture (Hi-C), we found that H1 depletion dampens inter- a
Despite overwhelming evidence supporting the role of genetics in susceptibility tocomplex diseases, such as autoimmune disorders, a fundamental unresolved questionis whether large numbers of sequence
We performed SMC1-mediated ChIA-PET analysis in both shBORIS and shLUC resistant Kelly cells. Overall design: SMC1 ChIA-PET data from shBORIS and shLUC resistant Kelly cells were generated by deep seq
We designed 4C-Seq experiments for hoxa13a, hoxa13b and hoxd13a promoters in three developmental stages in zebrafish embryos: 24, 48 and 60 hpf. 4C-seq samples for three different hox13 genes promoter
Table 6 indicates the average AUC score across ten classifiers where training data from one TF (rows) was used to train a classifier that classified TFBS for another TF (columns).
