Sequence alignments used for divergence analysis

Contains 2649 phylip alignment files used to calculate divergence in PAML. Each phylip file contains cDNA sequence of the six species plus zebra finch outgroup. Orthogroups were aligned with PRANK v121218 using the orthologous Taeniopygia guttata cDNA (taeGut3.2.4.75) as an outgroup and specifying the following guidetree; (((A. cygnoides, A. platyrhynchos), (N. meleagris, (P. cristatus, (M. gallopavo, P. colchicus)))), T. guttata). APL = Anas platyrhynchos, ACY = Anser cygnoides, MGA = Meleagris gallopavo, NME = Numida meleagris, PCO = Phasianus colchicus, PCR = Pavo cristatus, TGU= Taeniopygia guttata.