Gut microbiome composition and host transcriptome responses in chick Salmonella infection
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Gut microbiome composition and host transcriptome responses in chick Salmonella infection
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2025-11-30
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Additional file 4: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development
Gene expression data of small intestinal epithelial cells from germ-free (GF) and conventionally raised (CONV-R) mice at the three developmental stages W1, W4, and W12/16 determined by RNA sequencing.
Figshare2018-04-14 更新70
Intestinal microbiome adjusts the innate immune setpoint during colonization through negative regulation of MyD88
Host pathways mediating changes in immune states elicited by intestinal microbial colonization are incompletely characterized. Here we describe alterations of the host immune state induced by coloniza
NIAID Data Ecosystem40
Total RNA-Seq of testis and ovaries of conventional raised (convR) and Germ-free (GF) female mice under ad libitum feeding regimen.
Gut microbiota and the circadian clock are both key regulators of the metabolic processes. Although recent evidence points to the impact of the circadian clock on microbiota, gut microbiota effect on
Alliance of Genome Resources10
Interplay between microbial D-amino acids and host D-amino acid oxidase modifies murine mucosal defense and gut microbiota. DAO Microbiome
While L-amino acids are the building blocks for proteins synthesized in ribosomes in all kingdoms of life, D-amino acids (D-aa) are important in non-ribosome based functions. Mammals synthesize D-Ser
NIAID Data Ecosystem50
Single cell RNA sequencing analysis of germ free (GF) mouse Paneth cells and microbiome-transferred exGF mouse Paneth cells.. Single cell RNA sequencing analysis of germ free (GF) mouse Paneth cells and microbiome-transferred exGF mouse Paneth cells.
The single cell level Paneth cell transcriptome under gnotobiotic condition has not been resolved. How gut microbiome modulates Paneth cell transcriptome at single cell level in germ-free mice was not
NIAID Data Ecosystem10
