Estimates and confidence intervals of lambda for a few complex traits, variants included according to fdr threshold.

The bolded lines refer to estimators having the best overall performance in simulations. HDL, high density lipoprotein; LDL, low density lipoprotein; TG, triglyceride; DM, type 2 diabetes mellitus; Crohn, Crohn's disease. Bonf, inclusion threshold based on Bonferroni correction; fdrthres, inclusion threshold set at local fdr of 0.3. “wt” refers to weighting by 1-local fdr. Please refer to the previous tables for abbreviations of the estimators and the types of CI calculated.