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资源简介：
Genome sequencing
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创建时间：
2024-03-10
相关数据集
Additional file 1 of Characterizing chromatin interactions of regulatory elements and nucleosome positions, using Hi-C, Micro-C, and promoter capture Micro-C
Additional file 1: Table S1. Datasets used in this study. (A) data availability (B) QC statistics of Micro-C, Hi-C, and promoter capture Micro-C data (C) Additional metrics of promoter capture Micro-C
DataCite Commons2023-04-13 更新100
Condensin II Counters Cohesin and RNA Polymerase II in 3D Chromatin Organization
CTCF is present at the anchors of thousands of loops likely formed via cohesin-mediated loop extrusion in mammalian cells. Interaction domains present in D. melanogaster chromosomes form via the segre
NIAID Data Ecosystem50
Genome-wide maps of nuclear lamina interactions in AML12 cells.
We have used microarrays to identify LaminB1 occupancy signal in AML12 cell using the DamID protocol. We have performed DamID-chip on AML12 cell with four biological replicates.
NIAID Data Ecosystem40
Additional file 7 of Human transcriptional interactome of chromatin contribute to gene co-expression
Additional file 7:Co-expressed gene pairs have more Hi-C interactions than all pairs. T tests are used to test the difference between Hi-C interactions of co-expressed gene pairs and all pairs. In co-
DataCite Commons2024-02-16 更新70
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
GAMinG script (python) and sequence file (.dat) to prepare files to run molecular dynamics in GROMACS (see ndb.rice.edu for more info regarding how to run the simulations). Two .hic maps and two sampl
NIAID Data Ecosystem50
