Additional file 7 of Microbiota members from body sites of dairy cows are largely shared within individual hosts throughout lactation but sharing is limited in the herd

Additional file 7. List of core ASVs of the oral, nasal, vaginal and milk microbiota. Core ASVs of the 4 anatomic sites are listed for the different time points. Core ASV are defined as ASVs with relative abundance higher than 0.01% in more than 50% of the animals. ASVs in bold correspond to those that belong to the core ASV of a given site at least at 2 time points.