File S1 - <i>FANSe2</i>: A Robust and Cost-Efficient Alignment Tool for Quantitative Next-Generation Sequencing Applications

File S1 includes the following: Table S1. Six datasets downloaded from DDBJ Sequence Read Archive to analyze the error distribution. Table S2. The gene-specific PCR primers for validation of gene identifications. The genes identified solely by Bowtie2 are shaded as gray, and the genes identified solely by FANSe2 are not shaded. Table S3. Mapping programs tested in this study. Table S4. Test parameters for Figure 4. (PDF)