Bioinformatic scripts allowing the comparison of fungal metabarcoding pipelines

This dataset contains scripts and code that can be used to compare metabarcoding pipelines using a fungal mock community. These bioinformatics scripts were applied to the sequences available at https:

DataCite Commons2025-05-16 更新70

Metabarcoding pipeline and scripts

This folder contains all scripts used to process the raw sequence data into OTUs. Additionally, all scripts for data analysis and figure generation were included.

DataONE2017-05-17 更新130

Script associated with the bioinformatics pipeline

Script associated with the bioinformatics pipeline. The first script strings the programs together (used in Linux environment). The second script determines the SNPs and allelic variants. The third sc

DataONE2014-02-19 更新20