genbio-ai/ProteinGYM-DMS
收藏Hugging Face2024-12-07 更新2025-04-12 收录
下载链接：
https://hf-mirror.com/datasets/genbio-ai/ProteinGYM-DMS
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资源简介：
# ProteinGYM DMS Benchmark
DMS Benchmark includes three types of mutations: indels, single substitution and multiple substitutions.
Each tsv file contains all data for a single task, representing all possible mutations on a specific protein sequence. The filename corresponds to the task name. Here we use randomly cross-validation scheme, where the data for each task is randomly divided into five folds and the `fold_id` column indicates the fold assignment. The labels are continuous values ranging from 0 to 1, and the tasks are categorized into different functional groups. To check more dataset details, please refer to [ProteinGYM paper](https://www.biorxiv.org/content/10.1101/2023.12.07.570727v1)
|Mutation Type | Num Task | Categories|
|------------- |:-------------:|:-------------:|
|indels|66 | Activity, Expression, Fitness, Stability|
| substitutions| 217| Activity, Expression, Fitness, Stability, Binding|
提供机构：
genbio-ai
