Script code and commands

Script code and commands. genome_analysis.txt is source codes used for genome assembly and gene predictions. script_assess_genome_sequence.txt is commands performing assembly-stats and BUSCO. Functional_Annotation.sh and RNA-seq_data_analysis.sh are source codes used for RNA-Seq analysis and gene functional annotation analyses, respectively. PCA_Anaysis_of_Dataset1.r is R script code for PCA analysis. Cluster_Rscript.txt is source code for performing hierulcial clustering analysis.