Shigella metabolic models

NIAID Data Ecosystem2026-03-11 收录

微生物组代谢建模

细菌进化系统生物学

数据链接：

https://figshare.com/articles/dataset/Shigella_metabolic_models/8800673 数据链接链接失效反馈

官方服务：

资源简介：

These models were generated for the manuscript "Impact of insertion sequences on convergent evolution of Shigella species".

创建时间：

2019-07-08

Supplemental Table 5

微生物组代谢建模

代谢物分析

Supplemental Table 5: Correlation of microbiome metabolic potentials (CMP) with paired metabolite measurement. The significance of the correlation between A ) the tota

DataCite Commons2023-07-23 更新70

Data_Sheet_1_High-Quality Genome-Scale Models From Error-Prone, Long-Read Assemblies.ZIP

微生物组代谢建模

测序数据校正

Advances in nanopore-based sequencing techniques have enabled rapid characterization of genomes and transcriptomes. An emerging application of this sequencing technology is point-of-care characterizat

NIAID Data Ecosystem20

Additional file 2 of Metagenomic insights into the microbe-mediated B and K2 vitamin biosynthesis in the gastrointestinal microbiome of ruminants

微生物组代谢建模

生物素合成

Additional file 2: Table S1. Detailed information for B and K2 vitamin biosynthesis. Table S2. Relative abundance of 123 functional roles in the B and K2 vitamin biosynthesis pathways. Table S3. Distr

Figshare2024-02-26 更新10

Various files for the Persephone publication

微生物组代谢建模

约束型代谢重建

Various files used for the demo set associated with the original publication of the Persephone paper. Two zip files with the pan-species models used to create the community microbiome models. One zi

Zenodo2025-10-02 更新50

Supplementary Table S10 from Association between the gut microbiome and carotenoid plumage phenotype in an avian hybrid zone

鸟类羽毛表型

微生物组代谢建模

KEGG enzymes associated with plumage score, hybrid zone locality and sampling year in admixed individuals

Figshare2024-04-01 更新10