mOTUs3 - genome metadata

A tab-delimited file listing genomes used in mOTUs3 with metadata that map each genome to a mOTU and provide additional information such as: the data source, quality metrics and download links. Genome sequence files can be programmatically downloaded with a tool available at: https://github.com/motu-tool/motus_v3_genomes. GENOME Genome name MOTU Assigned mOTU GENOME_SOURCE progenomes2.0 or extension MGS_ADDED Were MGs from this genome added to the database? CHECKM_COMPLETENESS CheckM v1 completeness score CHECKM_CONTAMINATION CheckM v1 contamination score GUNC_PROGENOMES2.1 GUNC result using the progenomes 2.1 database ANVIO_COMPLETENES ANVIO v7.1 completeness score ANVIO_CONTAMINATION ANVIO v7.1 contamination score GTDB-R207 GTDB classification using the database release R207 ENVIRONMENT Source environment of genomes. Retrieved either from progenomes2.0 or from the associated biosample description DOWNLOAD_LINK Link to file containing genomes (one file per mOTU) DOWNLOAD_MD5 MD5 sum of the file ORIGINAL_DOWNLOAD_LINK Link to original genome if available