OR, odds ratio; 95% CI, 95% confidence interval. * Two-tailed P-values were calculated by chi-squared test for independence of haplotype counts. ‡ This haplotype was taken as the reference. Risk allel
Abbreviations: OR, odds ratio; 95% CI, 95% confidence interval. Psim: simulated P-value, which was calculated based on randomly permuting the trait and covariates and then computing the haplotype scor
R script that implements the haplotype-based GWAS to map epidermolysis bullosa. Description: R script that reads haplotypes, SNP-positions, eigenvectors and phenotypes to perform a haplotype-based ass
