Only samples with no missing data are included in the analyses. All nine loci were used in all P. vivax populations. In the P. falciparum populations, 8 loci were analysed in Bangka and Sumba, 6 in Ka
aPs, number of significant pairwise comparisons by Fisher's exact test after Bonferroni correction. bPT, number of all possible pairwise comparisons. cratio = Ps/PT. The ratios that were greater in do
