Metagenomes can be considered as mixtures of viral, bacterial, and other eukaryotic DNA sequences. Mining viral sequences from metagenomes could shed insight into virus–host relationships and expand v
Introduction: The avian influenza (AI) virus causes a highly contagious disease which is common in wild and domestic birds and sporadic in humans. Mutations and genetic reassortments among the 8 negat
Aureococcus anophagefferens Virus was first sequenced in 2013 using Illumina short reads. Due to a high density of repetitive regions on the terminal ends of the genome, the quality of the initial ass
We used the illumina platform to sequence poly-A selected and rRNA-depleted RNA from large numbers (hundreds) of wild-caught Drosophila, to survey the presence of viral sequences and to assemble new v
