AllTheBacteria/BacCorpus-prot-90

BacCorpus Protein 90是一个大规模、序列级聚类的细菌蛋白质序列数据集。它包含以90%序列同一性和90%覆盖度聚类的代表性蛋白质序列，源自BacCorpus，这是一个统一处理的细菌基因组资源，涵盖数百万个质量控制的分离基因组和宏基因组组装基因组。该数据集旨在训练和评估蛋白质语言模型和细菌基因组语言模型。蛋白质序列捕获了细菌基因组中大部分保守的功能信号，可用于模拟基因功能、蛋白质组成和基因组规模的细菌表型。BacCorpus Protein 90 is a large-scale, sequence-level clustered dataset of bacterial protein sequences. It contains representative protein sequences clustered at 90% sequence identity and 90% coverage, derived from BacCorpus, a uniformly processed bacterial genome resource spanning millions of quality-controlled isolate genomes and metagenome-assembled genomes. This dataset is intended for training and evaluating protein language models and bacterial genomic language models. Protein sequences capture much of the conserved functional signal in bacterial genomes and are useful for modelling gene function, protein composition, and genome-scale bacterial phenotypes.