This Python script calls a perl script written by Joshua C. Randall (available at: http://www.sph.umich.edu/csg/abecasis/Exact/) to perform an exact Hardy-Weinberg Equilibrium test (Wigginton et al.,
This Python script calls a perl script written by Joshua C. Randall (available at: http://www.sph.umich.edu/csg/abecasis/Exact/) to perform an exact Hardy-Weinberg Equilibrium test (Wigginton et al.,
Python scripts for extracting SNPs from 1-allele RAxML (phylip) files; and script for summarizing bootstrap values from RAxML 2-allele results. Additional details are commented in each script.
