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Mapping cell structure across scales by fusing protein images and interactions

NIAID Data Ecosystem2026-03-13 收录

蛋白质-RNA互作

细胞结构映射

数据链接：

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE171553 数据链接链接失效反馈

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资源简介：

Enhanced crosslinking and immunoprecipitation assay (eCLIP) for C-terminally FLAG-HA-tagged RPS3A in HEK293T cells. eCLIP-seq; 2 replicates

应用场景：

创建时间：

2021-11-28

蛋白质-RNA互作

植物热胁迫

To identify the in vivo targets of ALBA5, we performed enhanced crosslinking by UV and immunoprecipitation followed by high-throughput sequencing (eCLIP-seq) (Zhu et al., 2020) in triplicates using 5-

NIAID Data Ecosystem60

The human cellular nucleic acid binding protien binds G-rich elements close to translation initiation sires and promotes translation. [RNA-Seq]. Homo sapiens

蛋白质-RNA互作

翻译调控机制

CNBP is a eukaryote-conserved nucleic-acid binding protein required in mammals for embryonic development. It contains seven CCHC-type zinc-finger domains and was suggested to act as a nucleic acid cha

NIAID Data Ecosystem50

Co-immunoprecipitation of the small DUF1127 protein RSP_6037xFLAG and pRK0557_3xFLAG for RNA interaction

蛋白质-RNA互作

细菌转录组学

Many protein domains are conserved among different classes and are found in numerous species, but their function remains obscure. Data bases list more than 17,000 DUF1127 proteins but to date no biolo

NIAID Data Ecosystem30

Molecular interactions between Hel2 and RNA supporting ribosome-associated quality control [I]

核糖体相关质量控制

蛋白质-RNA互作

Ribosome-associated quality control (RQC) pathways monitor and respond to stalling of translating ribosomes. Using a newly developed technique based on in vivo UV crosslinking and mass spectrometry, w

NIAID Data Ecosystem60

Dithiothreitol (DTT) acts as a specific, UV-inducible cross-linker in elucidation of protein-RNA interactions

蛋白质-RNA互作

化学交联质谱

In the present paper, we introduce dithiothreitol (DTT) as a potent protein-RNA cross-linker. To prove this three model systems, a) a small synthetic peptide from smB'/B protein incubated with U1snRNA

NIAID Data Ecosystem30

Mapping cell structure across scales by fusing protein images and interactions

资源简介：

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