Statistical modeling, estimation, and remediation of sample index hopping in multiplexed droplet-based single-cell RNA-seq data.

Name: Statistical modeling, estimation, and remediation of sample index hopping in multiplexed droplet-based single-cell RNA-seq data.
Creator: McGill University
Published: 2019-07-03T00:00:00+08:00

Zenodo2019-07-03 更新2026-04-07 收录

单细胞RNA-seq索引跳跃校正

多路复用测序质量控制

数据链接：

https://zenodo.org/record/3267922 数据链接链接失效反馈

官方服务：

资源简介：

Validation data for inferring the sample index hopping rate. The <em>hiseq4000_joined_datatable_plexed_nonplexed.zip file contains read counts for four samples (two non-multiplexed and two multiplexed) joined by a cell-barcode, UMI, and gene-ID (CUG) key combination. The hiseq4000_inner_joined_with_labels.zip file contains only those CUGs that are observed in both the non-multiplexed and multiplexed samples.</em><em> </em>

提供机构：

McGill University

创建时间：

2019-07-03