COMPARTMENTS benchmark (yeast)

Name: COMPARTMENTS benchmark (yeast)
Creator: Janos X. Binder
Published: 2015-07-19T00:00:00+08:00

Figshare2016-01-19 更新2026-04-08 收录

蛋白质亚细胞定位

酵母模式生物

数据链接：

https://figshare.com/articles/dataset/COMPARTMENTS_benchmark_yeast_/1367408/1 数据链接链接失效反馈

官方服务：

资源简介：

This file constitutes the yeast benchmark set used for the COMPARTMENTS publication. All protein identifiers are consistent with STRING v9.

提供机构：

Janos X. Binder

创建时间：

2015-07-19

SaProtHub/Dataset-Subcellular_Localization-DeepLoc

蛋白质亚细胞定位

深度学习

该数据集用于预测蛋白质在细胞内的亚细胞定位，是一个10类分类任务。每个输入的蛋白质*x*被映射到一个标签*y* ∈ {0, 1, ..., 9}，其中数字标签代表不同的细胞内位置，如核、细胞质、细胞外等。数据集根据结构相似性被分为训练集、验证集和测试集，数据以LMDB格式组织，每个样本包含蛋白质的UniProt ID、结构感知序列、pLDDT值和分类标签。

Hugging Face2025-02-04 更新660

Nucleolar localization of the Werner syndrome protein in human cells

蛋白质亚细胞定位

衰老机制研究

Werner Syndrome (WS) is a human genetic disorder with many features of premature aging. The gene defective in WS (WRN) has been cloned and encodes a protein homologous to several helicases, including

PubMed Central1998-06-09 更新30

CERKL localizes to SGs and P-bodies.

蛋白质亚细胞定位

应激颗粒生物学

A and B) Colocalization of CERKL (HA) with three markers of SGs (PABP and eIF4E, detected with specific antibodies described in the Materials and Methods section), and the mRNAs poly(A) tail, detected

Figshare2016-02-23 更新20

Results of literature searches for published localization data on the 122_putative mito. protein set.

蛋白质亚细胞定位

线粒体蛋白质组学

The first tab shows all proteins from the list of 122_putative mito. proteins for which direct localization exists in the literature (44 proteins), 10 of which were localized to the mitochondrion. The

Figshare2022-08-19 更新40

Responding cells and average nuclear/cytosolic STAT5-GFP.

蛋白质亚细胞定位

JAK-STAT信号通路

Responding cells and average nuclear/cytosolic STAT5-GFP.

Figshare2018-09-18 更新30