Gut microbiota of wild arboreal and ground-feeding tropical primates

16S rRNA gene and ITS sequences from fecal samples of 12 groups of Udzungwa (Tanzania) red colobus Procolobus gordonorum (total number of samples: 89), and five groups of yellow baboon Papio cynocephalus (total number of samples: 69). The dataset consists of the following files: <strong>16S_raw.tar</strong>: raw 16S rRNA gene sequences; <strong>16S_filtered.fasta.gz</strong>: merged, adapter trimmed and quality filtered 16S rRNA gene sequences; <strong>16S_ID.txt</strong>: 16S file ID to sample ID mapping; <strong>ITS_raw.tar</strong>: raw ITS sequences; <strong>ITS_filtered.fasta.gz</strong>: merged, adapter trimmed and quality filtered ITS sequences; <strong>ITS_ID.txt</strong>: ITS file ID to sample ID mapping; <strong>Metadata.tsv</strong>: sample metadata; <strong>Accessions.tsv</strong>: ENA project and sample accessions; <strong>Helminths.tsv</strong>: helminths abundances table.