Gramene

Gramene是一个比较植物基因组学数据库，专注于作物和模式生物的基因组浏览器、注释、变异和比较分析工具。该平台提供植物代谢和调控通路浏览(Plant Reactome)、泛基因组分析(Plant Pan Genomes)、基因功能注释、BLAST序列搜索以及植物表达图谱等功能。Gramene还提供CLIMtools工具用于环境×基因组×表型关联分析，以及基于BioMart的高级基因组查询接口Gramene Mart。Gramene is a comparative plant genomics database dedicated to genome browsers, annotation, variation and comparative analysis tools for crops and model organisms. The platform offers Plant Reactome for browsing plant metabolic and regulatory pathways, Plant Pan Genomes for pan-genome analysis, gene functional annotation, BLAST sequence search, and plant expression atlases. Additionally, Gramene provides the CLIMtools suite for environment × genome × phenotype association analysis, as well as the BioMart-based advanced genomic query interface, Gramene Mart.

搜集汇总

背景与挑战

背景概述

Gramene是一个比较植物基因组学资源，专注于作物和模型生物的基因组分析。它提供基因组浏览器、注释、变异工具，以及代谢通路浏览、泛基因组分析、BLAST搜索和植物表达图谱等功能。