This file contains the python scripts used in this study. These scripts can be used to analysis next generation sequence data step by step, including: sorting, assembling, trimming, refining and combi
Python scripts for extracting SNPs from 1-allele RAxML (phylip) files; and script for summarizing bootstrap values from RAxML 2-allele results. Additional details are commented in each script.
Python scripts for extracting SNPs from 1-allele RAxML (phylip) files; and script for summarizing bootstrap values from RAxML 2-allele results. Additional details are commented in each script.