neurips2022_multiome

Processed and subsampled of the data provided in the Multimodal Single-Cell Integration NeurIPS 2022 challenge (https://www.kaggle.com/competitions/open-problems-multimodal/data). Data was filtered on donor "31800" and non-hidden celltypes. Subsequently, 2000 data points were randomly subsampled. The 2000 most highly variable genes were selected for the RNA data and peaks which appeared in less than 5% of the cells were filtered out, resulting in 11607 peaks.

本数据集由NeurIPS 2022多模态单细胞整合挑战赛（Multimodal Single-Cell Integration NeurIPS 2022 challenge）提供的原始数据经处理与下采样得到，原始数据下载链接为https://www.kaggle.com/competitions/open-problems-multimodal/data。首先对原始数据进行筛选，仅保留供体‘31800’的样本以及非隐藏细胞类型的数据；随后从中随机抽取2000个数据点作为子集。针对RNA测序数据，选取了2000个最高可变基因；针对峰值数据，过滤掉了在不足5%的细胞中出现的峰，最终得到11607个有效峰。