Proteins identified from the black smoker chimney Inferno hydrothermal vent plume meta-proteome - replicate Av1 - on the Axial seamount off the coast of Washington in 2011.
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<p>Proteins identified in the Inferno hydrothermal vent plume meta-proteome (replicate Av1). Only proteins identified by peptides with a protein probability >0.9 are listed. </p> <p>These data are reported as Supplementary Table 3 and discussed in <a href=\"http://dmoserv3.bco-dmo.org/data_docs/SulfurOxidizers/Mattes_2013_PlumeProt.pdf\" target=\"_blank\">Mattes et al., 2013</a>. (doi:10.1038/ismej.2013.113)</p> <p>The FASTA information in the data was expanded to include the metadata when those FASTA headers were linked to GenBank. </p> <p><em>Proteins that were identified in biological replicate Av2 that were not identified in biological replicate Av1. (GSO: Gamma Sulfur Oxidizer)</em></p> <p><img alt=\"\" src=\"https://datadocs.bco-dmo.org/d3/data_docs/SulfurOxidizers/Table5.png\" style=\"float:left; height:174px; width:637px\" /><br /> </p> <p> </p> <p> </p> <p> </p> <p> </p> <p>\"Although fewer proteins were identified in Av2, nearly all (94%) of the proteins identified in Av2 were also identified in Av1. Differences in the total number of proteins identified in replicate samples may result from differences in the amount of biomass obtained during sample processing.\"</p> <p><strong>DMO notes:</strong><br /> Put multiple FASTA entries on separate lines<br /> Split out one number in FASTA header for linking<br /> Left it sorted by Total Independent Spectra column<br /> Added linkage column<br /> Removed commas in 'consensus annotation' column (signals database to put in new column)<br /> Reordered columns to put KEGG last -- much longer than any other column</p>
<p>本数据集为因弗诺热液羽流宏蛋白质组（meta-proteome）中鉴定得到的蛋白质（生物学重复Av1）。仅列出由肽段鉴定得到、蛋白质置信度大于0.9的蛋白质。</p><p>本数据集以补充表3的形式发布，相关讨论详见<a href="http://dmoserv3.bco-dmo.org/data_docs/SulfurOxidizers/Mattes_2013_PlumeProt.pdf" target="_blank">Mattes等，2013</a>（DOI：10.1038/ismej.2013.113）。</p><p>当FASTA格式序列文件（FASTA）的标题与GenBank数据库（GenBank）关联时，本数据集的FASTA格式序列信息已扩展纳入元数据。</p><p><em>以下为仅在生物学重复Av2中鉴定得到、而未在Av1中检出的蛋白质（GSO：γ-硫氧化细菌（Gamma Sulfur Oxidizer））。</em></p><p><img alt="" src="https://datadocs.bco-dmo.org/d3/data_docs/SulfurOxidizers/Table5.png" style="float:left; height:174px; width:637px" /><br /> </p><p> </p><p> </p><p> </p><p> </p><p>“尽管在Av2中鉴定得到的蛋白质数量更少，但Av2中检出的蛋白质中近94%也可在Av1中被鉴定到。生物学重复样本间鉴定得到的蛋白质总数差异，可能源于样品处理过程中获取的生物量不同。”</p><p><strong>DMO处理说明：</strong><br />将多条FASTA格式序列条目分开展示至独立行<br />拆分FASTA格式序列标题中的编号字段以实现关联链接<br />按照“总独立质谱数”列进行排序<br />新增关联列<br />移除“一致性注释”列中的逗号（提示数据库将其拆分至新列）<br />调整列顺序，将KEGG（京都基因与基因组百科全书，KEGG）列置于最后——该列长度远长于其他列</p>
