PhD Thesis Chapter 2: Alignments and partition files

Danielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: Haloniscus). The files included here are the final three alignments (Datasets A–B) and the dataset exon partition files used in PartitionFinder. The three alignments (containing up to 25% (A), 50% (B), and 75% (C) missing sequences) include sequence data for 40 isopod samples and consist of 420, 807, and 1,026 exons, respectively.丹妮尔·斯特林格（Danielle Stringer）博士学位论文第二章：针对等足目（潮虫科：Haloniscus属）外显子捕获的、基于469个单拷贝蛋白编码基因的定制诱饵设计开发与评估。本次收录的文件包含最终三份比对文件以及用于PartitionFinder的外显子分区数据集文件。三份比对文件均纳入40个等足目样本的序列数据，其中对应数据集A、B、C的比对分别允许最高25%、50%和75%的缺失序列比例，对应的外显子数量依次为420、807和1026。