Additional file 13 of FixNCut: single-cell genomics through reversible tissue fixation and dissociation
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Additional file 13: Table 12. This table contains the differentially expressed (DE) genes between fixed/cryo versus cryo human colon biopsies, separated by cell population. The test was performed using Seurat MAST, with genes considered DE if they had a FDR adjusted p-value < 0.05 and were present in at least 10% of cells (see Methods). Positive Log2FC values indicate higher expression in fixed/cryo samples, while negative values indicate higher expression in cryo samples.
补充文件13:表12。本表格收录了人类结肠活检组织在固定/冷冻处理组与仅冷冻处理组之间的差异表达(differentially expressed,DE)基因,并按细胞群进行了分类呈现。本次差异表达分析采用Seurat MAST工具完成,筛选标准为:经错误发现率(false discovery rate,FDR)校正后的P值小于0.05,且该基因在至少10%的细胞中可被检测到(详见方法部分)。Log2倍数变化(Log2FC)为正值代表该基因在固定/冷冻样本中表达水平更高,负值则代表其在仅冷冻样本中表达水平更高。
创建时间:
2024-08-15



