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Haplotype-associated lung tumor modifier (Halt) loci identified by haplotype analysis, using the 140K BROAD SNP panel.

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Figshare2015-12-02 更新2026-04-29 收录
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aPosition of the central SNP, in mega bases (Mb) based on NCBI m37 mouse assembly.bGlobal -log P is the minus logarithm of the p-value for the haplotype sliding window (window size: 3-SNPs).cUI, urethane-induced lung tumor incidence, UM, urethane-induced lung tumor multiplicity.dAt each Halt locus, the intercrosses whose parental strains carry different alleles, and that have herein been analyzed, are indicated. AHF2, (A/J×C3H/He)F2; CHF2, (BALB/c×C3H/He)F2; CWF2, (BALB/c×SWR/J)F2.

a. 核心单核苷酸多态性(Single Nucleotide Polymorphism, SNP)的位置,单位为兆碱基(Mb),基于NCBI m37小鼠基因组组装版本。 b. 全局 -log P值为单体型滑动窗口(窗口大小:3个SNP)对应的p值的负对数。 c. UI指氨基甲酸乙酯(urethane)诱导的肺肿瘤发生率,UM指氨基甲酸乙酯诱导的肺肿瘤多发数。 d. 在每个Halt基因座(locus)上,将亲本品系携带不同等位基因且本文已开展分析的互交系予以标注。其中AHF2代表(A/J×C3H/He)F2,CHF2代表(BALB/c×C3H/He)F2,CWF2代表(BALB/c×SWR/J)F2。

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2015-12-02
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