Input files for generating maximum likelihood trees using RAxML:raxml -p $Seed -f a -x $Seed -s $infile -n $outfile -m GTRGAMMA -# 100\nCode and input files for generating cophylogeny for CH7BAC7 and
File with model specification and maximum likelihood parameters of the model with highest likelihood among all models tested ("speciation from a hybrid population at Python Island").
Fasta file and maximum likelihood tree of trimmed, aligned RuBisCo sequences (including Form I'). Sequences are taken from metagenomic assemblies and are representative across all Forms of RuBisCO.
This Excel file contains the results of a MEME (mixed effects model of evolution) analysis (Murrell, B. et al., 2012) of site-specific evolution of two teleost androgen receptors, ARα and ARβ.
