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High-throughput sequencing data of Cas9d editing activity
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创建时间：
2024-12-08
相关数据集
Screening_Zebrafish_for_CRISPR_induced_indels
Loci from CRISPR injected Zebrafish was amplified and sequenced to identify indels induced by the CRISPR/Cas9 system.
NIAID Data Ecosystem60
Deep sequencing of the edited genomic sites after targeted knock-in (exogenous EGFP integrated into the genome)
This study was performed to compare the frequencies of indel formation at the edited genomic sites (on-target sites) upon targeted knock-in using CRISPR/Cas9 nickases and those elicited by the use of
NIAID Data Ecosystem40
DepMap Predictability with Subsampling
These files contain a summary of predictability of CRISPRGeneEffect in Depmap 24Q2 with variable numbers of cell lines provided to the predictive model. Subsets of the CRISPR gene effect matrix were s
Figshare2024-09-09 更新30
sgRNAs used in this study and CRISPR targeting efficiency measured by TIDE analysis.
Genomic DNA was harvested from CRISPR-targeted and non-targeted cells and the targeted locus was amplified by PCR (~200bp upstream and downstream of the predicted cut site), and sequenced via capillar
NIAID Data Ecosystem40
Genome-wide maps of chromatin state in human primary CAR-T cells [ChIPseq, ATAC-seq]
We report the transcriptomic and epigentic profile of human primary CD19-28z CAR-T cells. Overall design: CRISPR gene editing was used to delete MED12 or the "safe harbor" control gene AAVS1. Gene-edi
NIAID Data Ecosystem40
